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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. a, nonagouti
Sequence ID:NM_015770
Entrez Gene ID:50518
Ensembl ID:ENSMUSG00000027596

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H1|2 89.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 155013042 - 155031041

NM_015770 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
172154839305154839376
73242154871347154871516
243307154873411154873475
308692154876363154876747

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3154863IncompleteBC009122nonagouti

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056585  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015770 NP_056585 Q03288 Agouti

Related Sequences

 
mRNAGenPeptSwissProt
S63413 AAA15908 Q03288
L06451 AAA37201 Q03288
S70320 AAP19635 Q03288
S70326 AAP19636 Q03288
S70394 AAP19637 Q03288
S74479 AAP31517 Q03288
S74489 AAP31519 Q03288
S74493 AAP31520 Q03288

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus a NP_056585 R.norvegicus Asip 24152   NP_443211 95
H.sapiens ASIP 434 Gene Info NP_001663 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)