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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lgals3bp, lectin, galactoside-binding, soluble, 3 binding protein
Sequence ID:NM_011150
Entrez Gene ID:19039
Ensembl ID:ENSMUSG00000033880

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 E

Chromosomal Position (from UCSC)

Chromosomal Position:11: 118392750 - 118401959

NM_011150 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11371118254065118255435
13721624118257904118258156
16251756118259434118259565
17571948118259693118259884
19492022118261041118261114
20232168118263099118263244

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30666981Full LengthBC090658lectin, galactoside-binding, soluble, 3 binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035280  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011150 NP_035280 Q07797 SRCR
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Related Sequences

 
mRNAGenPeptSwissProt
L16894 AAA37499 Q07797
BC090658 AAH90658 Q07797
AK079915 BAC37782 Q07797
AK137836 BAE23505 Q07797
AK150021 BAE29246 Q07797
AK152182 BAE31013 Q07797
AK153313 BAE31894 Q07797
AK153396 BAE31958 Q07797
AK155031 BAE33003 Q07797
X67809 CAA48010 Q07797

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lgals3bp NP_035280 R.norvegicus Lgals3bp 245955   NP_620796 88
H.sapiens LGALS3BP 3959 Gene Info NP_005558 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)