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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arl5a, ADP-ribosylation factor-like 5A
Sequence ID:NM_182994
Entrez Gene ID:75423
Ensembl ID:ENSMUSG00000036093

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C1.1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 52397953 - 52398854

NM_182994 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
144825225347052257951
448346345226042552260576
463547185226758152267664
471948665227158352271730
486749275227215552272215
492852125228010952280393

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6821976Full LengthBC048170ADP-ribosylation factor-like 5A
30843038Full LengthBC100307ADP-ribosylation factor-like 5A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_892039  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_182994 NP_892039 Q80ZU0
Q498A0
Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC048170 AAH48170 Q80ZU0
Q498A0
BC100307 AAI00308 Q80ZU0
Q498A0
AK147525 BAE27973 Q80ZU0
Q498A0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arl5a NP_892039 R.norvegicus Arl5a 117050   NP_446431 99
H.sapiens ARL5A 26225 Gene Info NP_036229 99
A.gambiae AgaP_AGAP011254 1270671   XP_309388 74
D.melanogaster CG7197 38931   NP_648201 73
A.thaliana ARFC1 821868   NP_001189951 57
C.elegans arl-5 176392   NP_499178 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)