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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nr5a1, nuclear receptor subfamily 5, group A, member 1
Sequence ID:NM_139051
Entrez Gene ID:26423
Ensembl ID:ENSMUSG00000026751

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2 23.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 38692655 - 38712234

NM_139051 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116053854817938549783
160617533855569438555841
175418733855748638557605
187425023856343038564058
250326443856592938566070
264527613856617538566291
276229473856987638570061

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047261Full LengthBC110476nuclear receptor subfamily 5, group A, member 1
40047262Full LengthBC110477nuclear receptor subfamily 5, group A, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620639  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139051 NP_620639 P33242 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
BC110476 AAI10477 P33242
BC110477 AAI10478 P33242
AF511594 AAM43952 P33242
D10584 BAA01441 P33242
AB000490 BAA19127 P97782
AK134378 BAE22121 P33242
AK144376 BAE25855 P33242
AK156911 BAE33893 Q3U0G1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr5a1 NP_620639 R.norvegicus Nr5a1 83826   XP_002729205 100
H.sapiens NR5A1 2516 Gene Info NP_004950 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)