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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scd4, stearoyl-coenzyme A desaturase 4
Sequence ID:NM_183216
Entrez Gene ID:329065
Ensembl ID:ENSMUSG00000050195

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C3|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 44333325 - 44346743

NM_183216 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11904440781544408004
1914584440848344408750
4595894441199044412120
5907954441339944413604
79610284441571044415942
102930724441918944421232

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055846Full LengthBC141234stearoyl-coenzyme A desaturase 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_899039  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_183216 NP_899039 Q6T707 FA_desaturase

Related Sequences

 
mRNAGenPeptSwissProt
BC038322 AAH38322 Q8CFY4
BC141234 AAI41235 B9EIY5
AY430080 AAR06950 Q6T707

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scd4 NP_899039 R.norvegicus Scd4 499358   XP_574671 89
A.gambiae AgaP_AGAP004572 1274712   XP_313877 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)