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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rfx3, regulatory factor X, 3 (influences HLA class II expression)
Sequence ID:NM_001166414
NM_011265
Entrez Gene ID:19726
Ensembl ID:ENSMUSG00000040929

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C1|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 27768317 - 28011045

 Exon Info From UCSC:
NM_001166414
NM_011265

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4483833Full LengthBC017598regulatory factor X, 3 (influences HLA class II expression)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035395  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166414 NP_001159886    
NM_011265 NP_035395 P48381 RFX_DNA_binding

Related Sequences

 
mRNAGenPeptSwissProt
BC017598 AAH17598 P48381
AK030008 BAC26730 P48381
AK041120 BAC30829 P48381
AK132267 BAE21069 Q3V1T0
X76090 CAA53704 P48381

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rfx3 NP_001159886 H.sapiens RFX3 5991 Gene Info NP_602304 99
D.melanogaster Rfx 41266   NP_649999 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)