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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Sequence ID:NM_011416
NM_026003
Entrez Gene ID:67155
Ensembl ID:ENSMUSG00000024921

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C1|19 17.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 26770935 - 26778273

 Exon Info From UCSC:
NM_011416
NM_026003

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30544092Full LengthBC075641SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
5360847IncompleteBC056199SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
5363490IncompleteBC022975SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035546  NP_080279  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011416 NP_035546   SNF2_N
Helicase_C
Bromodomain
HSA
TCH
NM_026003 NP_080279 Q9D007 Bromodomain

Related Sequences

 
mRNAGenPeptSwissProt
U53564 AAB64344 O35846
BC004653 AAH04653 Q99KH6
BC022975 AAH22975 Q8R1W7
BC056199 AAH56199 Q7TND4
BC075641 AAH75641 Q6DIC0
AK011935 BAB27925 Q9D007
AK020092 BAB31990 Q9CTU8
AK135871 BAE22708 Q3UX55
AK147322 BAE27845 Q3UHL2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarca2 NP_035546 R.norvegicus Smarca2 361745   NP_001004446 98
H.sapiens SMARCA2 6595 Gene Info NP_620614 97
S.pombe snf21 2542638   NP_594861 51
S.cerevisiae STH1 854680   NP_012140 49
N.crassa NCU06488 3873266   XP_957128 46
S.pombe snf22 2538881   NP_588472 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)