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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ctdp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Sequence ID:NM_026295
Entrez Gene ID:67655
Ensembl ID:ENSMUSG00000033323

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E3|18 54.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 80407964 - 80440859

 Exon Info From UCSC:
NM_026295

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6394578Full LengthBC053435CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
5255508IncompleteBC052934CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080571  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_026295 NP_080571 Q7TSG2 EC 3.1.3.16 BRCT
NIF

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC052934 AAH52934 Q7TSG2 EC 3.1.3.16
BC053435 AAH53435 Q7TSG2 EC 3.1.3.16
AK016213 BAB30150 Q7TSG2 EC 3.1.3.16
AK156617 BAE33777 Q3U0S4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctdp1 NP_080571 R.norvegicus Ctdp1 291414   NP_001099601 93
H.sapiens CTDP1 9150 Gene Info NP_004706 80
D.melanogaster Fcp1 37925   NP_611934 42
A.gambiae AgaP_AGAP005119 1274797   XP_314000 41
C.elegans fcp-1 172719   NP_492423 34
A.thaliana CPL4 5008312   NP_001078764 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)