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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kdm1b, lysine (K)-specific demethylase 1B
Sequence ID:NM_172262
Entrez Gene ID:218214
Ensembl ID:ENSMUSG00000038080

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A5|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 47063005 - 47084596

 Exon Info From UCSC:
NM_172262

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5323227Full LengthBC023917amine oxidase, flavin containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_758466  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172262 NP_758466 Q8CIG3 Amino_oxidase
zf-CW

Related Sequences

 
mRNAGenPeptSwissProt
BC023917 AAH23917 Q8CIG3
AK028553 BAC26005 Q8CIG3
AK078920 BAC37460 Q8CIG3
AK169851 BAE41410 Q3TE38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kdm1b NP_758466 R.norvegicus Kdm1b 306819   NP_001100813 97
C.elegans amx-1 175493   NP_497772 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)