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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ap3s1, adaptor-related protein complex 3, sigma 1 subunit
Sequence ID:NM_009681
Entrez Gene ID:11777
Ensembl ID:ENSMUSG00000024480

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 C|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 46741948 - 46790482

NM_009681 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11654690157046901734
1662574691402446914115
2583694691765646917767
3704414693884146938912
4425494694031446940421
55014794694955046950479

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4187607Full LengthBC012656adaptor-related protein complex 3, sigma 1 subunit
30713247Full LengthBC108327adaptor-related protein complex 3, sigma 1 subunit
40130262Full LengthBC131985adaptor-related protein complex 3, sigma 1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033811  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009681 NP_033811 Q9DCR2
Q3U8S0
Clat_adaptor_s

Related Sequences

 
mRNAGenPeptSwissProt
AF084575 AAC72819 Q9DCR2
Q3U8S0
BC012656 AAH12656 Q9DCR2
Q3U8S0
BC108327 AAI08328 Q9DCR2
Q3U8S0
BC131985 AAI31986 Q3U8S0
AK002565 BAB22191 Q9DCR2
AK137489 BAE23377 Q9DCR2
Q3U8S0
AK152100 BAE30947 Q9DCR2
Q3U8S0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ap3s1 NP_033811 H.sapiens AP3S1 1176 Gene Info NP_001275 100
S.pombe aps3 2542114   NP_593212 63
P.falciparum PFL2425w 811537   XP_001350889 51
S.cerevisiae APS3 853429   NP_012510 50
N.crassa NCU09461 3879364   XP_963216 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)