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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Agps, alkylglycerone phosphate synthase
Sequence ID:NM_172666
Entrez Gene ID:228061
Ensembl ID:ENSMUSG00000042410

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 75832176 - 75927175

 Exon Info From UCSC:
NM_172666

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6332574Full LengthBC063086alkylglycerone phosphate synthase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766254  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_172666 NP_766254 Q8C0I1 EC 2.5.1.26 FAD_binding_4
FAD-oxidase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC063086 AAH63086 Q8C0I1 EC 2.5.1.26
AK031049 BAC27229 Q8C0I1 EC 2.5.1.26
AK053686 BAC35474 Q8BKC4  
AK164922 BAE37969 Q3TNW8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Agps NP_766254 H.sapiens AGPS 8540 Gene Info NP_003650 92
D.melanogaster CG10253 36669   NP_611006 55
C.elegans ads-1 175192   NP_497185 55
A.gambiae AgaP_AGAP004358 1274507   XP_313642 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)