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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nrxn1, neurexin I
Sequence ID:NM_020252
NM_177284
Entrez Gene ID:18189
Ensembl ID:ENSMUSG00000024109

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E5|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 90036899 - 91092802

 Exon Info From UCSC:
NM_020252
NM_177284

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6466916Full LengthBC047146neurexin I
30544573IncompleteBC079893neurexin I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064648  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020252 NP_064648   EGF
Laminin_G_1
Laminin_G_2
NM_177284 NP_796258    

Related Sequences

 
mRNAGenPeptSwissProt
BC047146 AAH47146 Q9CS84
AK017578 BAB30815 Q9CS84
AB093249 BAC41433 Q9CS84
AJ006802 CAA07257 Q9CS84

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nrxn1 NP_064648 R.norvegicus Nrxn1 60391   NP_068535 100
H.sapiens NRXN1 9378 Gene Info NP_001129131 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)