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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptprm, protein tyrosine phosphatase, receptor type, M
Sequence ID:NM_008984
Entrez Gene ID:19274
Ensembl ID:ENSMUSG00000033278

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E1.1|17 38.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 67094981 - 67095524

 Exon Info From UCSC:
NM_008984

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30056619Full LengthBC058614protein tyrosine phosphatase, receptor type, M
30536348Full LengthBC079621protein tyrosine phosphatase, receptor type, M

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033010  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008984 NP_033010 P28828 EC 3.1.3.48 fn3
ig
Y_phosphatase
MAM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC058614 AAH58614 Q6PDN0  
BC079621 AAH79621 Q68FM4  
AK220171 BAD90356 P28828 EC 3.1.3.48
AK164246 BAE37702 Q3TPN4  
AK034753 BAE43289 Q3V3S2  
X58287 CAA41225 P28828 EC 3.1.3.48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptprm NP_033010 R.norvegicus Ptprm 29616   NP_001162103 99
H.sapiens PTPRM 5797 Gene Info NP_001098714 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)