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Gene Info

Gene Information For:Mm. Atp6v1d, ATPase, H+ transporting, lysosomal V1 subunit D
Sequence ID:NM_023721
Entrez Gene ID:73834
Ensembl ID:ENSMUSG00000021114

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C3|12 36.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 78842981 - 78861459

NM_023721 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16297994396879944596
6307087994621279946290
7097757994875379948819
7768797994938279949485
8809247995072679950770
9259927995145879951525
99310727995325179953330
107311907995821379958330
119114107996240579962624

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3991107Full LengthBC033457ATPase, H+ transporting, lysosomal V1 subunit D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076210  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023721 NP_076210 Q3U861
P57746
ATP-synt_D

Related Sequences

 
mRNAGenPeptSwissProt
AF298810 AAG30225 Q3U861
P57746
BC033457 AAH33457 Q3U861
P57746
AK003446 BAB22795 Q9CTI8
AK146129 BAE26921 Q3UK81
AK146448 BAE27180 Q3UJH5
AK147910 BAE28222 Q3U861
P57746
AK150981 BAE30008 Q3U684
AK152367 BAE31157 Q3U861
P57746
AK153250 BAE31841 Q3U684
AK165761 BAE38369 Q3U861
P57746

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6v1d NP_076210 R.norvegicus Atp6v1d 299159   NP_955418 100
H.sapiens ATP6V1D 51382 Gene Info NP_057078 98
A.gambiae AgaP_AGAP010298 1278594   XP_318202 73
D.melanogaster Vha36 44702   NP_651987 73
C.elegans vha-14 176338   NP_499094 71
S.cerevisiae VMA8 856659   NP_010863 54
N.crassa NCU08035 3878812   XP_962705 53
S.pombe vma8 2539581   NP_588513 48
P.falciparum PF13_0227 814194   XP_001350140 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)