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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Upf2, UPF2 regulator of nonsense transcripts homolog (yeast)
Sequence ID:NM_001081132
Entrez Gene ID:326622
Ensembl ID:ENSMUSG00000043241

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 6026896 - 6028976

 Exon Info From UCSC:
NM_001081132

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861378Full LengthBC138358UPF2 regulator of nonsense transcripts homolog (yeast)
8861379Full LengthBC138359UPF2 regulator of nonsense transcripts homolog (yeast)
6531961IncompleteBC049622UPF2 regulator of nonsense transcripts homolog (yeast)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081132 NP_001074601    

Related Sequences

 
mRNAGenPeptSwissProt
BC049622 AAH49622 Q810R2
BC138358 AAI38359 A2AT37
BC138359 AAI38360 A2AT37

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Upf2 NP_001074601 R.norvegicus Upf2 361271   NP_001101891 99
H.sapiens UPF2 26019 Gene Info NP_056357 97
A.gambiae AgaP_AGAP000337 1271923   XP_310780 41
D.melanogaster Upf2 31724   NP_572434 41
A.thaliana AT2G39260 818511   NP_181459 39
N.crassa NCU05267 3877905   XP_961757 39
S.cerevisiae NMD2 856476   NP_011944 28
S.pombe upf2 2542147   NP_593784 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)