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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr1h4, nuclear receptor subfamily 1, group H, member 4
Sequence ID:NM_001163504
NM_001163700
NM_009108
Entrez Gene ID:20186
Ensembl ID:ENSMUSG00000047638

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C2|10 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 89454476 - 89506644

 Exon Info From UCSC:
NM_001163504
NM_001163700
NM_009108

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4241705Full LengthBC015261nuclear receptor subfamily 1, group H, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033134  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163504 NP_001156976    
NM_001163700 NP_001157172 Q60641  
NM_009108 NP_033134   Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
U09418 AAC52978 Q60641
U09417 AAC53065 Q60641
U09416 AAC53066 Q60641
BC015261 AAH15261 Q60641
AK132255 BAE21061 Q3V1T8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr1h4 NP_033134 R.norvegicus Nr1h4 60351   NP_068513 97
H.sapiens NR1H4 9971 Gene Info NP_001193922 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta