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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Angpt1, angiopoietin 1
Sequence ID:NM_009640
Entrez Gene ID:11600
Ensembl ID:ENSMUSG00000022309

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 B3.1|15 14.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 42424670 - 42425611

NM_009640 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
324084225627042258675
240925394226982042269950
254027064229121242291378
270728084229970142299802
280929364230792342308050
293731694232777242328004
317032914234382942343950
329234474235504942355204
344840784250771042508340

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30436666Full LengthBC067410angiopoietin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033770  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009640 NP_033770 O08538 Fibrinogen_C

Related Sequences

 
mRNAGenPeptSwissProt
U83509 AAB50558 O08538
BC067410 AAH67410 O08538
AK012027 BAB27983 Q9CST2
AK088439 BAC40354 Q8C2K6
AK172868 BAD32146 Q6A0F0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Angpt1 NP_033770 R.norvegicus Angpt1 89807   NP_445998 98
H.sapiens ANGPT1 284 Gene Info NP_001186788 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)