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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prdx1, peroxiredoxin 1
Sequence ID:NM_011034
Entrez Gene ID:18477
Ensembl ID:ENSMUSG00000028691

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D1|4 47.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 116685611 - 116699511

NM_011034 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
162116358203116358264
63179116360011116360127
180333116364380116364533
334456116365487116365609
457587116366321116366451
5881417116371775116372604

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5710010Full LengthBC083348peroxiredoxin 1
6819164Full LengthBC086648peroxiredoxin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011034 NP_035164 P35700 EC 1.11.1.15 AhpC-TSA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC083348 AAH83348 P35700 EC 1.11.1.15
BC086648 AAH86648 P35700 EC 1.11.1.15
D16142 BAA03713 P35700 EC 1.11.1.15
D21252 BAA04796 P35700 EC 1.11.1.15
AK002287 BAB21990 P35700 EC 1.11.1.15
AK008711 BAB25847 P35700 EC 1.11.1.15
AK010688 BAB27120 P35700 EC 1.11.1.15
AK083243 BAC38827 P35700 EC 1.11.1.15
AK145138 BAE26255 P35700 EC 1.11.1.15
AK150797 BAE29860 P35700 EC 1.11.1.15
AK151459 BAE30417 P35700 EC 1.11.1.15
AK151760 BAE30667 Q3U9J9  
AK167624 BAE39676 P35700 EC 1.11.1.15
AK169154 BAE40933 P35700 EC 1.11.1.15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prdx1 NP_035164 R.norvegicus Prdx1 117254   NP_476455 97
R.norvegicus LOC100363379 100363379   XP_002729147 96
H.sapiens PRDX1 5052 Gene Info NP_001189360 95
S.cerevisiae TSA2 852064   NP_010741 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)