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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tbr1, T-box brain gene 1
Sequence ID:NM_009322
Entrez Gene ID:21375
Ensembl ID:ENSMUSG00000035033

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C1.3|2 32.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 61810867 - 61812270

NM_009322 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19476164250961643455
94811026164403061644184
110312246164468861644809
122513836164533561645493
138414456164655561646616
144639766164963961652169

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6825394Full LengthBC052737T-box brain gene 1
6826831Full LengthBC058399T-box brain gene 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033348  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009322 NP_033348 Q64336 T-box

Related Sequences

 
mRNAGenPeptSwissProt
U49251 AAA92011 Q64336
BC052737 AAH52737 Q64336
BC058399 AAH58399 Q64336
AK158835 BAE34688 Q3TY75

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tbr1 NP_033348 R.norvegicus Tbr1 680427   XP_001056898 100
H.sapiens TBR1 10716 Gene Info NP_006584 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)