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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Plxnd1, plexin D1
Sequence ID:NM_026376
Entrez Gene ID:67784
Ensembl ID:ENSMUSG00000030123

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115954810 - 115955576

 Exon Info From UCSC:
NM_026376

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4219417IncompleteBC019530plexin D1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080652  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026376 NP_080652 Q3UH93 Sema
PSI
TIG
Plexin_cytopl

Related Sequences

 
mRNAGenPeptSwissProt
BC019530 AAH19530 Q8VCL8
AY688678 AAT99561 Q3UH93
AK129175 BAC97985 Q6ZQ83
AK147513 BAE27964 Q3UH93
AK155833 BAE33456 Q3U1N9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Plxnd1 NP_080652 R.norvegicus Plxnd1 312652   NP_001101351 98
H.sapiens PLXND1 23129 Gene Info NP_055918 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)