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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Acvr1b, activin A receptor, type 1B
Sequence ID:NM_007395
Entrez Gene ID:11479
Ensembl ID:ENSMUSG00000000532

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F2|15 60.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 101212027 - 101213678

NM_007395 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1111101004555101004665
112351101024362101024601
352600101025239101025487
601831101029214101029444
832999101032408101032575
10001156101033368101033524
11571281101034883101035007
12821412101039510101039640
14133277101041167101043031

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40131078Full LengthBC145775activin A receptor, type 1B
40131080Full LengthBC145777activin A receptor, type 1B
6844539IncompleteBC059832activin A receptor, type 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031421  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007395 NP_031421 Q3TZF1
Q61271
EC 2.7.11.30 Pkinase
Activin_recp
TGF_beta_GS

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC145775 AAI45776 Q3TZF1  
BC145777 AAI45778 Q3TZF1  
AK157910 BAE34258 Q3TZF1
Q61271
EC 2.7.11.30
Z31663 CAA83483 Q3TZF1
Q61271
EC 2.7.11.30

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acvr1b NP_031421 R.norvegicus Acvr1b 29381   NP_954700 99
H.sapiens ACVR1B 91 Gene Info NP_004293 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)