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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ndrg1, N-myc downstream regulated gene 1
Sequence ID:NM_008681
Entrez Gene ID:17988
Ensembl ID:ENSMUSG00000005125

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 D2|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 66929321 - 66969639

 Exon Info From UCSC:
NM_008681

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4237943Full LengthBC015282N-myc downstream regulated gene 1
4242075Full LengthBC071235N-myc downstream regulated gene 1
9054254Full LengthBC171968N-myc downstream regulated gene 1
9055858Full LengthBC141246N-myc downstream regulated gene 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032707  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008681 NP_032707 Q62433 Ndr

Related Sequences

 
mRNAGenPeptSwissProt
U60593 AAB03484 Q62433
Q545R3
U52073 AAB58249 Q62433
BC015282 AAH15282 Q62433
Q545R3
BC071235 AAH71235 Q62433
Q545R3
BC141246 AAI41247 Q545R3
BC171968 AAI71968 B7ZWC0
AK004548 BAB23362 Q62433
Q545R3
AK161860 BAE36611 Q3TSR4
AK170281 BAE41683 Q62433
Q545R3
AK170439 BAE41797 Q3TD08
AK170636 BAE41927 Q62433
Q545R3
AK170809 BAE42042 Q62433
Q545R3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ndrg1 NP_032707 R.norvegicus Ndrg1 299923   NP_001011991 99
H.sapiens NDRG1 10397 Gene Info NP_001128714 94
A.thaliana NDL2 831051   NP_568251 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)