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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ddx28, DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Sequence ID:NM_028038
Entrez Gene ID:71986
Ensembl ID:ENSMUSG00000045538

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 106009621 - 106011433

NM_028038 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
21871108533516108535385

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129479Full LengthBC120556DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
40129505Full LengthBC120582DEAD (Asp-Glu-Ala-Asp) box polypeptide 28

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082314  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_028038 NP_082314 Q9CWT6 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC120556 AAI20557 Q9CWT6 EC 3.6.4.13
BC120582 AAI20583 Q9CWT6 EC 3.6.4.13
AK010396 BAB26907 Q9CWT6 EC 3.6.4.13
AK163480 BAE37362 Q9CWT6 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ddx28 NP_082314 R.norvegicus Ddx28 364995   NP_001102368 92
H.sapiens DDX28 55794 Gene Info NP_060850 81
A.gambiae AgaP_AGAP012856 1267546   XP_306103 37
A.thaliana RH39 826559   NP_849348 36
D.melanogaster KH1 33254   NP_608544 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)