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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdc42ep1, CDC42 effector protein (Rho GTPase binding) 1
Sequence ID:NM_027219
Entrez Gene ID:104445
Ensembl ID:ENSMUSG00000049521

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 78842646 - 78850902

NM_027219 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1797867307678673154
808047867752478678248
80525427867959478681331

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4910994Full LengthBC016250CDC42 effector protein (Rho GTPase binding) 1
6441478Full LengthBC083130CDC42 effector protein (Rho GTPase binding) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081495  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027219 NP_081495   PBD

Related Sequences

 
mRNAGenPeptSwissProt
BC016250 AAH16250 Q91W92
BC083130 AAH83130 Q91W92
AK007896 BAB25335 Q91W92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdc42ep1 NP_081495 R.norvegicus Cdc42ep1 315121   NP_001073168 92
H.sapiens CDC42EP1 11135 Gene Info NP_689449 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)