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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ube2l3, ubiquitin-conjugating enzyme E2L 3
Sequence ID:NM_009456
Entrez Gene ID:22195
Ensembl ID:ENSMUSG00000038965

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A3|16 10.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 17152015 - 17201481

NM_009456 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
122681715210717154374
226924551716008217160268
245625511717650417176599
255226091720152717201584

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4216580Full LengthBC093503ubiquitin-conjugating enzyme E2L 3
4502101Full LengthBC106149ubiquitin-conjugating enzyme E2L 3
6809632IncompleteBC049075ubiquitin-conjugating enzyme E2L 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033482  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009456 NP_033482 Q561N4
P68037
EC 6.3.2.19 UQ_con

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC093503 AAH93503 Q561N4
P68037
EC 6.3.2.19
BC106149 AAI06150 Q561N4
P68037
EC 6.3.2.19
AK007265 BAB24925 Q561N4
P68037
EC 6.3.2.19
AK152522 BAE31282 Q3U7T7  
AK159876 BAE35448 Q3TW19  
AK165620 BAE38300 Q561N4
P68037
EC 6.3.2.19
AK167847 BAE39867 Q3TIH9  
AJ130961 CAA10265 Q561N4
P68037
EC 6.3.2.19
X97042 CAA65755 Q561N4
P68037
EC 6.3.2.19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ube2l3 NP_033482 H.sapiens UBE2L3 7332 Gene Info NP_003338 100
A.gambiae AgaP_AGAP001056 1272856   XP_311779 83
D.melanogaster UbcD10 37035   NP_477414 74
C.elegans ubc-18 175985   NP_498541 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)