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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Jmjd5, jumonji domain containing 5
Sequence ID:NM_029842
Entrez Gene ID:77035
Ensembl ID:ENSMUSG00000030752

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 125444675 - 125462259

NM_029842 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1117132588189132588305
118618132595741132596241
619785132598604132598770
786918132599946132600078
919963132600477132600521
9641113132603388132603537
11141206132604428132604520
12072379132604600132605772

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5355270Full LengthBC024807jumonji domain containing 5

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_029842 NP_084118 Q9CXT6 EC 1.14.11.27  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC024807 AAH24807 Q9CXT6 EC 1.14.11.27
AK014006 BAB29111 Q9CXT6 EC 1.14.11.27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Jmjd5 NP_084118 R.norvegicus Jmjd5 308976   NP_001032273 92
H.sapiens JMJD5 79831 Gene Info NP_001138820 78
A.thaliana AT3G20810 821629   NP_850617 44
C.elegans C06H2.3 179543   NP_505831 43
D.melanogaster CG13902 38097   NP_612063 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)