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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vax2, ventral anterior homeobox containing gene 2
Sequence ID:NM_011912
Entrez Gene ID:24113
Ensembl ID:ENSMUSG00000034777

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C3|6 35.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 83711294 - 83737979

NM_011912 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12808366125783661536
2814688368309283683279
46912338368753383688297

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30942578Full LengthBC090635ventral anterior homeobox containing gene 2
40101824Full LengthBC116389ventral anterior homeobox containing gene 2
40101825Full LengthBC116390ventral anterior homeobox containing gene 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036042  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011912 NP_036042 Q9WTP9 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
AF028715 AAF21632 Q9WTP9
BC090635 AAH90635 Q14B19
BC116389 AAI16390 Q14B19
BC116390 AAI16391 Q14B19
Y17792 CAB56169 Q9WTP9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vax2 NP_036042 R.norvegicus Vax2 64572   NP_072159 96
H.sapiens VAX2 25806 Gene Info NP_036608 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)