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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smcr7l, Smith-Magenis syndrome chromosome region, candidate 7-like (human)
Sequence ID:NM_178719
Entrez Gene ID:239555
Ensembl ID:ENSMUSG00000022412

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 80234107 - 80251530

NM_178719 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11028006450980064610
1034518006623480066582
4526028007716680077316
6037808007830380078480
78110438007867080078932
104450848007975880083798

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860652Full LengthBC137633Smith-Magenis syndrome chromosome region, candidate 7-like (human)
5011290IncompleteBC029706expressed sequence AI452372

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178719 NP_848834 Q8BGV8  

Related Sequences

 
mRNAGenPeptSwissProt
BC137633 AAI37634 B2RPW2
AK038466 BAC30010 Q8BGV8
AK044773 BAC32082 Q8BGV8
AK050546 BAC34317 Q8BGV8
AK080375 BAC37896 Q8BGV8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smcr7l NP_848834 R.norvegicus Smcr7l 315141   NP_001007710 99
H.sapiens SMCR7L 54471 Gene Info NP_061881 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)