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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Glra3, glycine receptor, alpha 3 subunit
Sequence ID:NM_080438
Entrez Gene ID:110304
Ensembl ID:ENSMUSG00000038257

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B2|8 26.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 56062464 - 56110479

NM_080438 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11505841962158419770
1512785846992258470049
2793465848391358483980
3475705851837858518601
5716535854122758541309
6547915856391058564047
79210065856778058567994
100711505858924358589386
115111955859162658591670
119614745860387058604148

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015658Full LengthBC148711glycine receptor, alpha 3 subunit
100014459BC140461glycine receptor, alpha 3 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_536686  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080438 NP_536686   Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
AF214575 AAF34619 Q9JL29
BC140461 AAI40462  
BC148711 AAI48712  
AF362764 AAK51962 Q91XP5
AY230204 AAP22967 Q91XP5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Glra3 NP_536686 H.sapiens GLRA3 8001 Gene Info NP_006520 99
R.norvegicus Glra3 114516   NP_446176 99
C.elegans glc-2 172103   NP_491470 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)