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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clec1b, C-type lectin domain family 1, member b
Sequence ID:NM_001204239
NM_001204253
NM_019985
Entrez Gene ID:56760
Ensembl ID:ENSMUSG00000030159

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 129397585 - 129405277

Transcript StartTranscript EndChromosomal Start Chromosomal End
1382129347314129347695
383478129350077129350172
479604129351489129351614
605756129351759129351910
757863129353578129353684
8641088129355124129355348

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
574821Full LengthBC064054C-type lectin domain family 1, member b

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064369  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204239 NP_001191168    
NM_001204253 NP_001191182    
NM_019985 NP_064369 Q9JL99 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF201457 AAF36831 Q9JL99
BC064054 AAH64054 Q9JL99
EF070191 ABK60036 Q9JL99
EF070192 ABK60037 A0T1G3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clec1b NP_064369 R.norvegicus Clec1b 500336   XP_575687 90
H.sapiens CLEC1B 51266 Gene Info NP_057593 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)