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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Jph3, junctophilin 3
Sequence ID:NM_020605
Entrez Gene ID:57340
Ensembl ID:ENSMUSG00000025318

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 121730562 - 121790821

NM_020605 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1442124254462124254903
4431220124276866124277643
12211345124306060124306184
13462214124308459124309327
22153637124313298124314720

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047801Full LengthBC105307junctophilin 3
40047803Full LengthBC104736junctophilin 3
40047806Full LengthBC103682junctophilin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065630  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020605 NP_065630 Q9ET77 MORN

Related Sequences

 
mRNAGenPeptSwissProt
BC103682 AAI03683 Q9ET77
BC104736 AAI04737 Q9ET77
BC105307 AAI05308 Q9ET77
AB024449 BAB12046 Q9ET77
AK045706 BAC32465 Q8BR43
AK082880 BAC38666 Q9ET77

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Jph3 NP_065630 R.norvegicus Jph3 307916   NP_001100907 99
H.sapiens JPH3 57338 Gene Info NP_065706 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)