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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tsc2, tuberous sclerosis 2
Sequence ID:NM_001039363
NM_011647
Entrez Gene ID:22084
Ensembl ID:ENSMUSG00000002496

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17 10.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 24596634 - 24629069

 Exon Info From UCSC:
NM_001039363
NM_011647

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6409037Full LengthBC052449tuberous sclerosis 2
6409037Full LengthBC060701tuberous sclerosis 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035777  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039363 NP_001034452    
NM_011647 NP_035777 Q61037 Rap_GAP
Tuberin
NM_013630 NP_038658 O08852 Lectin_C
LRR_1
PKD
LRRNT
LRRCT
PLAT
WSC
GPS
REJ
PKD_channel

Related Sequences

 
mRNAGenPeptSwissProt
U37775 AAA86901 Q61037
U37775 AAA86902 Q61037
U39818 AAB18754 Q61037
U70209 AAC53207 O08852
AF132986 AAD27867 Q61037
BC052449 AAH52449 Q7TT21
BC060701 AAH60701 Q7TT21
AK014622 BAB29468 Q9CUT4
AK220312 BAD90231 Q5DU58
AK147016 BAE27610 Q3UI96
AK147487 BAE27945 Q3UHB2
AK147908 BAE28220 Q3UGI8
AK148062 BAE28321 Q3UG88
AK148072 BAE28325 Q3UG84
AK154998 BAE32984 Q3U306
AK161158 BAE36220 Q3TTV4
AK163991 BAE37575 Q3TQ10
AK164586 BAE37839 Q3TP98
AK170589 BAE41898 Q3TCQ7
AK171007 BAE42178 Q3TBX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tsc2 NP_035777 R.norvegicus Tsc2 24855   NP_036812 98
H.sapiens TSC2 7249 Gene Info NP_000539 92
A.gambiae AgaP_AGAP011123 1270802   XP_309523 38
D.melanogaster gig 40201   NP_524177 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta