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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pydc3, Pyrin domain containing 3
Sequence ID:NM_001162938
Entrez Gene ID:100033459
Ensembl ID:ENSMUSG00000066677

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 173673910 - 173698392

NM_001162938 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1287175603810175604096
288572175607808175608092
573679175609060175609166
6801633175612795175613748
16341701175620797175620864
17021999175625702175625999
20002987175627535175628522

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001162938 NP_001156410 Q3V3Q4  

Related Sequences

 
mRNAGenPeptSwissProt
AK041099 BAC30821 Q3V3Q4
AK036671 BAE43297 Q3V3Q4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pydc3 NP_001156410 M.musculus Pydc4 623121 Gene Info NP_001170820 98
M.musculus Gm4955 240921 Gene Info XP_136331 84
M.musculus BC094916 545384 Gene Info NP_001019892 48
M.musculus Mnda 381308 Gene Info NP_001028622 46
M.musculus Ifi204 15951 Gene Info NP_032355 45
M.musculus Gm16340 100504287 Gene Info XP_003084512 41
M.musculus Pyhin1 236312 Gene Info NP_778191 41
M.musculus Ifi205 226695 Gene Info NP_766236 40
M.musculus Ifi203 15950 Gene Info NP_001038946 39
M.musculus Mndal 100040462   NP_001164324 37
M.musculus AI607873 226691 Gene Info XP_985790 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)