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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Syt9, synaptotagmin IX
Sequence ID:NM_021889
Entrez Gene ID:60510
Ensembl ID:ENSMUSG00000062542

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F2

Chromosomal Position (from UCSC)

Chromosomal Position:7: 107370990 - 107506618

NM_021889 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1358114514303114514660
359710114568560114568911
7111257114579788114580334
12581378114645606114645726
13791550114647675114647846
15511680114650002114650131
16813816114690033114692168

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860923Full LengthBC137904synaptotagmin IX
40130772Full LengthBC132495synaptotagmin IX

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068689  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021889 NP_068689 Q9R0N9 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC132495 AAI32496 Q9R0N9
BC137904 AAI37905 Q9R0N9
AB026802 BAA85774 Q9R0N9
AK089115 BAC40759 Q9R0N9
AK156631 BAE33784 Q9R0N9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syt9 NP_068689 R.norvegicus Syt9 60564   NP_445776 100
H.sapiens SYT9 143425 Gene Info NP_783860 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)