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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chfr, checkpoint with forkhead and ring finger domains
Sequence ID:NM_172717
Entrez Gene ID:231600
Ensembl ID:ENSMUSG00000014668

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 110135841 - 110136561

 Exon Info From UCSC:
NM_172717

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6510480Full LengthBC049792checkpoint with forkhead and ring finger domains

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172717 NP_766305    

Related Sequences

 
mRNAGenPeptSwissProt
BC049792 AAH49792 Q810L3
AK052473 BAC35008 Q810L3
AK077629 BAC36912 Q810L3
AK133154 BAE21536 Q3V0G8
AK147892 BAE28209 Q810L3
AK154038 BAE32331 Q810L3
AK155295 BAE33172 Q810L3
AK155525 BAE33309 Q810L3
AK169182 BAE40960 Q810L3
AK169193 BAE40969 Q810L3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chfr NP_766305 R.norvegicus Chfr 288734   NP_001009258 94
H.sapiens CHFR 55743 Gene Info NP_001154816 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)