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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gpnmb, glycoprotein (transmembrane) nmb
Sequence ID:NM_053110
Entrez Gene ID:93695
Ensembl ID:ENSMUSG00000029816

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B2.3|6 21.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 49036679 - 49056782

 Exon Info From UCSC:
NM_053110

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4164706Full LengthBC026375glycoprotein (transmembrane) nmb

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444340  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053110 NP_444340 Q99P91 PKD

Related Sequences

 
mRNAGenPeptSwissProt
BC026375 AAH26375 Q99P91
AF322054 AAK14240 Q99P91
AK044764 BAC32074 Q99P91
AK076347 BAC36306 Q99P91
AK079220 BAC37578 Q8BVA0
AK149700 BAE29036 Q3UE75
AK150739 BAE29813 Q99P91
AK154617 BAE32716 Q99P91
AK159165 BAE34867 Q3TXG7
AK159270 BAE34949 Q3TXG7
AK159747 BAE35339 Q3TWC7
AK170506 BAE41844 Q99P91
AK171347 BAE42404 Q3TBB0
AK171441 BAE42454 Q99P91
AK171465 BAE42471 Q99P91
AK171474 BAE42479 Q99P91
AK171517 BAE42501 Q99P91
AK171608 BAE42560 Q3TAV1
AK171618 BAE42567 Q3TAV1
AJ251685 CAB65272 Q99P91

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpnmb NP_444340 R.norvegicus Gpnmb 113955   NP_579832 89
H.sapiens GPNMB 10457 Gene Info NP_001005340 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)