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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lin28a, lin-28 homolog A (C. elegans)
Sequence ID:NM_145833
Entrez Gene ID:83557
Ensembl ID:ENSMUSG00000050966

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 134006104 - 134018741

NM_145833 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12992133559244133562235
29933177133563825133564009
31783374133573967133574163
33753480133574625133574730

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30432006Full LengthBC068304lin-28 homolog (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_665832  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145833 NP_665832 Q8K3Y3 zf-CCHC
CSD

Related Sequences

 
mRNAGenPeptSwissProt
BC068304 AAH68304 Q8K3Y3
AF521097 AAM77749 Q8K3Y3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lin28a NP_665832 R.norvegicus Lin28a 500562   NP_001102739 98
H.sapiens LIN28A 79727 Gene Info NP_078950 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)