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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ifi30, interferon gamma inducible protein 30
Sequence ID:NM_023065
Entrez Gene ID:65972
Ensembl ID:ENSMUSG00000031838

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 70762974 - 70766651

NM_023065 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
172847328667173286938
2853387328702673287079
3394917328762573287777
4925847328844573288537
5856297328861773288661
6306597328866373288692
6608427328881873289000
8439977329040773290561

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6528891Full LengthBC054852interferon gamma inducible protein 30

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075552  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023065 NP_075552 Q9ESY9 GILT

Related Sequences

 
mRNAGenPeptSwissProt
AF290973 AAG00598 Q9ESY9
AF309649 AAG34681 Q9ESY9
BC054852 AAH54852 Q9ESY9
AK156914 BAE33895 Q9ESY9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifi30 NP_075552 R.norvegicus Ifi30 290644   NP_001025197 88
H.sapiens IFI30 10437 Gene Info NP_006323 64
A.thaliana AT1G07080 837219   NP_563779 38
A.gambiae AgaP_AGAP009747 1279154   XP_318831 35
C.elegans pqn-48 173743   NP_494711 33
D.melanogaster CG41378 5740475   NP_001163836 32
C.elegans F37H8.5 3564874   NP_496397 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)