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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ik, IK cytokine
Sequence ID:NM_011879
Entrez Gene ID:24010
Ensembl ID:ENSMUSG00000024474

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B2|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 36744772 - 36757431

 Exon Info From UCSC:
NM_011879

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4920184Full LengthBC014739IK cytokine
4982612Full LengthBC026569IK cytokine
5364953Full LengthBC029671IK cytokine
5366230Full LengthBC033356IK cytokine
5369477Full LengthBC029694IK cytokine

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036009  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011879 NP_036009 Q9Z1M8 RED_C
RED_N

Related Sequences

 
mRNAGenPeptSwissProt
BC014739 AAH14739 Q9Z1M8
BC026569 AAH26569 Q9Z1M8
BC029671 AAH29671 Q9Z1M8
BC029694 AAH29694 Q9Z1M8
BC033356 AAH33356 Q9Z1M8
AK029644 BAC26544 Q8CDT0
AK050625 BAC34349 Q8C7D0
AK087976 BAC40070 Q8C2T9
AK163766 BAE37486 Q3TJY5
AK167238 BAE39360 Q3TJY5
AJ006130 CAA06880 Q9Z1M8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ik NP_036009 R.norvegicus Ik 291659   NP_001005537 100
H.sapiens IK 3550 Gene Info NP_006074 98
D.melanogaster CG18005 41091   NP_649865 58
A.gambiae AgaP_AGAP004738 1278487   XP_318083 56
C.elegans smu-2 173693   NP_494559 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)