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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pparg, peroxisome proliferator activated receptor gamma
Sequence ID:NM_001127330
NM_011146
Entrez Gene ID:19016
Ensembl ID:ENSMUSG00000000440

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3-F1|6 52.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115422065 - 115490401

 Exon Info From UCSC:
NM_001127330
NM_011146

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4191539Full LengthBC021798peroxisome proliferator activated receptor gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035276  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001127330 NP_001120802    
NM_011146 NP_035276 P37238 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
U10374 AAA19971 P37238
U01664 AAA62110 P37238
U09138 AAA62277 P37238
U01841 AAC52134 P37238
BC021798 AAH21798 Q6GU14
AY208183 AAO45097 Q6GU14
AY208184 AAO45098 Q6GU14
AY243585 AAP42200 Q6GU14
EF062476 ABK39948 A0N0C8
GQ868647 ACX47078 D0EPX6
GQ868648 ACX47079 D0EPX7
GQ868649 ACX47080 D0EPX6
GQ868650 ACX47081 D0EPX9
CT010340 CAJ18548 Q4FJR2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pparg NP_035276 R.norvegicus Pparg 25664   NP_037256 100
H.sapiens PPARG 5468 Gene Info NP_056953 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta