Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lsm1, LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Sequence ID:NM_026032
Entrez Gene ID:67207
Ensembl ID:ENSMUSG00000037296

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 A3

Chromosomal Position (from UCSC)

Chromosomal Position:8: 25793745 - 25802529

NM_026032 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11272689606226896188
1281962690262826902696
1973122690414826904263
31323602691239926914446

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5054997Full LengthBC021460LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026032 NP_080308 Q8VC85  

Related Sequences

 
mRNAGenPeptSwissProt
BC021460 AAH21460 Q8VC85
Q544C9
AK006006 BAB24361 Q9CR79
AK012814 BAB28489 Q9CR79
AK019398 BAB31701 Q9CRP6
AK041290 BAC30891 Q8VC85
Q544C9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lsm1 NP_080308 H.sapiens LSM1 27257 Gene Info NP_055277 98
R.norvegicus Lsm1 364624   NP_001102346 97
D.melanogaster LSm1 37413   NP_611559 63
A.gambiae AgaP_AGAP001686 1281490   XP_321407 58
C.elegans lsm-1 174700   NP_496385 58
A.thaliana AT1G19120 838495   NP_564072 52
S.pombe lsm1 2540520   NP_595520 47
S.cerevisiae LSM1 853318   NP_012411 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)