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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rps6ka1, Ribosomal protein S6 kinase polypeptide 1
Sequence ID:NM_009097
Entrez Gene ID:20111
Ensembl ID:ENSMUSG00000003644

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 133865389 - 133865837

 Exon Info From UCSC:
NM_009097

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5098650Full LengthBC094470ribosomal protein S6 kinase polypeptide 1
5703939IncompleteBC049076ribosomal protein S6 kinase polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033123  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009097 NP_033123 P18653 EC 2.7.11.1 Pkinase
Pkinase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M28489 AAA50300 P18653 EC 2.7.11.1
AF084468 AAD11415 Q9Z278  
BC049076 AAH49076 Q810V8  
BC094470 AAH94470 Q505N6  
AK148208 BAE28414 Q3UFZ5  
AK167790 BAE39820 Q3TIM6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rps6ka1 NP_033123 H.sapiens RPS6KA1 6195 Gene Info NP_002944 99
R.norvegicus Rps6ka1 81771   NP_112369 98
C.elegans rskn-1 172647   NP_001021602 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta