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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ehd1, EH-domain containing 1
Sequence ID:NM_010119
Entrez Gene ID:13660
Ensembl ID:ENSMUSG00000024772

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19 2.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 6276905 - 6300096

NM_010119 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
148362768956277377
48458162812176281314
58299462942136294625
995115962975326297696
1160318262980736300095

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4981832Full LengthBC043332EH-domain containing 1
5042951Full LengthBC054828EH-domain containing 1
5343275IncompleteBC037094EH-domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034249  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010119 NP_034249 Q80ZZ0
Q9WVK4
Dynamin_N

Related Sequences

 
mRNAGenPeptSwissProt
AF099186 AAD45423 Q80ZZ0
Q9WVK4
AF173156 AAF24223 Q80ZZ0
Q9WVK4
BC037094 AAH37094 Q8K1X5
BC043332 AAH43332 Q80ZZ0
Q9WVK4
BC054828 AAH54828 Q80ZZ0
AK012896 BAB28540 Q80ZZ0
Q9WVK4
AK088980 BAC40684 Q80ZZ0
Q9WVK4
AK154651 BAE32742 Q80ZZ0
Q9WVK4
AK159943 BAE35499 Q80ZZ0
Q9WVK4
AK160535 BAE35852 Q3TUW9
AK166701 BAE38956 Q80ZZ0
Q9WVK4
AK167721 BAE39763 Q3TIT3
AK168610 BAE40477 Q3TGS1
AK170679 BAE41953 Q3TCK3
AK172539 BAE43057 Q80ZZ0
Q9WVK4
AK172669 BAE43123 Q3T9A1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ehd1 NP_034249 R.norvegicus Ehd1 293692   NP_001011939 100
H.sapiens EHD1 10938 Gene Info NP_006786 99
D.melanogaster Past1 41569   NP_524332 69
A.gambiae AgaP_AGAP004593 1275941   XP_315231 68
C.elegans rme-1 179010   NP_001024194 68
A.thaliana EHD1 821573   NP_001030731 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)