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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fads1, fatty acid desaturase 1
Sequence ID:NM_146094
Entrez Gene ID:76267
Ensembl ID:ENSMUSG00000010663

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10182972 - 10196874

 Exon Info From UCSC:
NM_146094

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4196030Full LengthBC026848fatty acid desaturase 1
4239695Full LengthBC026831fatty acid desaturase 1
5100199Full LengthBC022139fatty acid desaturase 1
5696722Full LengthBC063053fatty acid desaturase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666206  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_146094 NP_666206 Q920L1 Cyt-b5
FA_desaturase

Related Sequences

 
mRNAGenPeptSwissProt
BC022139 AAH22139 Q920L1
BC026831 AAH26831 Q920L1
BC026848 AAH26848 Q920L1
BC063053 AAH63053 Q920L1
AK002976 BAB22490 Q9DCA9
AB072976 BAB69894 Q920L1
AK033308 BAC28228 Q920L1
AK083959 BAC39079 Q920L1
AK154367 BAE32539 Q920L1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fads1 NP_666206 R.norvegicus Fads1 84575   NP_445897 97
H.sapiens FADS1 3992 Gene Info NP_037534 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)