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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atp6v0c, ATPase, H+ transporting, lysosomal V0 subunit C
Sequence ID:NM_009729
Entrez Gene ID:11984
Ensembl ID:ENSMUSG00000024121

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 24163867 - 24169438

NM_009729 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6440462Full LengthBC083129ATPase, H+ transporting, lysosomal V0 subunit C
30938468Full LengthBC099475ATPase, H+ transporting, lysosomal V0 subunit C
40130544Full LengthBC132267ATPase, H+ transporting, lysosomal V0 subunit C
40130888Full LengthBC132611ATPase, H+ transporting, lysosomal V0 subunit C
5708539IncompleteBC057084ATPase, H+ transporting, lysosomal V0 subunit C
6820042IncompleteBC050939ATPase, H+ transporting, lysosomal V0 subunit C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033859  

Protein Infomation

NM_009729 NP_033859 P63082 ATP-synt_C

Related Sequences

M64298 AAA39775 P63082
BC050939 AAH50939 Q80YP7
BC083129 AAH83129 A3KML5
BC099475 AAH99475 A3KML5
BC126881 AAI26882 A4FVC9
BC132267 AAI32268 A3KML5
BC132611 AAI32612 A3KML5
AK002570 BAB22195 P63082
AK002871 BAB22419 P63082
AK028239 BAC25834 Q8C1D9
AK146159 BAE26942 Q3UK60
AK170346 BAE41735 P63082

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Atp6v0c NP_033859 R.norvegicus Atp6v0c 170667   NP_570836 100
H.sapiens ATP6V0C 527 Gene Info NP_001185498 91
D.melanogaster Vha16 44307   NP_476801 85
S.pombe vma3 2542471   NP_594799 76
N.crassa NCU01332 3877578   XP_961418 75
S.cerevisiae VMA3 856686   NP_010887 72
C.elegans vha-1 176383   NP_499165 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)