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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cherp, calcium homeostasis endoplasmic reticulum protein
Sequence ID:NM_138585
Entrez Gene ID:27967
Ensembl ID:ENSMUSG00000052488

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.3|8 34.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 72460482 - 72475135

 Exon Info From UCSC:
NM_138585

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5322208Full LengthBC032191calcium homeostasis endoplasmic reticulum protein
4208903IncompleteBC020488calcium homeostasis endoplasmic reticulum protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_613051  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138585 NP_613051 Q8CGZ0 G-patch
Surp

Related Sequences

 
mRNAGenPeptSwissProt
BC032191 AAH32191  
AF536541 AAN77182 Q8CGZ0
AK017525 BAB30790 Q9CYM4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cherp NP_613051 R.norvegicus Cherp 290614   NP_001099534 99
H.sapiens CHERP 10523 Gene Info NP_006378 96
D.melanogaster scaf6 3346235   NP_001014589 41
C.elegans tag-65 179857   NP_506386 40
A.gambiae AgaP_AGAP005953 3290075   XP_315991 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)