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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sc4mol, sterol-C4-methyl oxidase-like
Sequence ID:NM_025436
Entrez Gene ID:66234
Ensembl ID:ENSMUSG00000031604

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 64718144 - 64733578

NM_025436 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110376719694167197977
103811926719913867199292
119313196720126067201386
132014686720238467202532
146917536720642067206704
175418246721230467212374

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3152545Full LengthBC006802sterol-C4-methyl oxidase-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079712  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_025436 NP_079712 Q9CRA4 EC 1.14.13.72 Sterol_desat

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC006802 AAH06802 Q9CRA4 EC 1.14.13.72
AK005090 BAB23811 Q9CRA4 EC 1.14.13.72
AK005441 BAB24035 Q9CRA4 EC 1.14.13.72
AK045059 BAC32201 Q9CRA4 EC 1.14.13.72
AK146684 BAE27358 Q9CRA4 EC 1.14.13.72
AK151135 BAE30143 Q9CRA4 EC 1.14.13.72
AK169017 BAE40814 Q9CRA4 EC 1.14.13.72

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sc4mol NP_079712 R.norvegicus Msmo1 140910   NP_543162 95
H.sapiens MSMO1 6307 Gene Info NP_006736 89
S.pombe erg25 2543373   NP_592903 43
N.crassa NCU06402 3878388   XP_962240 42
A.thaliana SMO2-2 817488   NP_850133 41
A.thaliana SMO2-1 837254   NP_563789 40
S.cerevisiae ERG25 852951   NP_011574 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)