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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccdc130, Coiled-coil domain containing 130
Sequence ID:NM_026350
Entrez Gene ID:67736
Ensembl ID:ENSMUSG00000004994

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 C3

Chromosomal Position (from UCSC)

Chromosomal Position:8: 84258299 - 84258747

NM_026350 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111328678169386782824
113312718678301186783149
127214448678419286784364
144515878678444186784583
158816488678563886785698
164917048678689186786946
170517878678776086787842
178818418678820786788260
184220808679073486790972
208120998679424086794258

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5041100Full LengthBC021321coiled-coil domain containing 130

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080626  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026350 NP_080626 Q9D516 DUF572

Related Sequences

 
mRNAGenPeptSwissProt
BC008614 AAH08614 Q922B5
BC021321 AAH21321 Q9D516
AK015911 BAB30026 Q9D516
AK003379 BAC25033 Q8BN00

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccdc130 NP_080626 R.norvegicus Ccdc130 304656   NP_001032733 94
H.sapiens CCDC130 81576 Gene Info NP_110445 81
A.gambiae AgaP_AGAP007890 3291610   XP_555619 54
D.melanogaster CG15084 37178   NP_611383 53
A.thaliana AT1G25682 839146   NP_173930 49
C.elegans ZK1307.9 174518   NP_496077 46
N.crassa NCU05961 3874729   XP_958575 45
S.pombe cwc16 2540801   NP_595734 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)