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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clpx, caseinolytic peptidase X (E.coli)
Sequence ID:NM_001044389
NM_011802
Entrez Gene ID:270166
Ensembl ID:ENSMUSG00000015357

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 C|9 36.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 65294308 - 65330642

 Exon Info From UCSC:
NM_001044389
NM_011802

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6593118Full LengthBC061153caseinolytic peptidase X (E.coli)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001044389 NP_001037854    
NM_011802 NP_035932 Q9JHS4  

Related Sequences

 
mRNAGenPeptSwissProt
AF134983 AAD42187 Q9JHS4
BC061153 AAH61153 Q6P8N8
AK041024 BAC30786 Q8BRZ3
AK080339 BAC37883 Q8C4Z5
AK165208 BAE38078 Q3TNL0
AJ276991 CAC01232 Q9JHS4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clpx NP_035932 R.norvegicus Clpx 300786   NP_001007804 98
H.sapiens CLPX 10845 Gene Info NP_006651 96
A.gambiae AgaP_AGAP002996 1272962   XP_563112 66
D.melanogaster CG4538 42369   NP_732463 63
A.thaliana CLPX 835416   NP_568792 55
A.thaliana AT1G33360 840230   NP_564423 54
A.thaliana AT5G49840 835047   NP_568714 53
C.elegans D2030.2 172511   NP_001021076 46
N.crassa NCU05427 3879398   XP_963250 44
S.cerevisiae MCX1 852528   NP_009786 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)