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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Rnf10, ring finger protein 10
Sequence ID:NM_016698
Entrez Gene ID:50849
Ensembl ID:ENSMUSG00000041740

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 62.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115241770 - 115272894

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3602969Full LengthBC010342ring finger protein 10
6816989Full LengthBC058527ring finger protein 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057907  

Protein Infomation

NM_016698 NP_057907 Q3UIW5 zf-C3HC4

Related Sequences

BC010342 AAH10342 Q3UIW5
AB026621 BAA84700 Q3UIW5
AK129106 BAC97916 Q3UIW5
AK146728 BAE27391 Q3UIW5
AK156502 BAE33735 Q3U0W6
AK165617 BAE38297 Q3UIW5
AK168523 BAE40402 Q3UIW5
AK171098 BAE42247 Q3TBR0
AK172065 BAE42807 Q3UIW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Rnf10 NP_057907 R.norvegicus Rnf10 288710   NP_001011904 96
H.sapiens RNF10 9921 Gene Info NP_055683 93
D.melanogaster CG12099 38181   NP_647623 40
A.gambiae AgaP_AGAP007954 1277998   XP_317518 35
N.crassa NCU11263 5847613   XP_001728335 32
S.pombe SPBP8B7.23 2541365   NP_596530 31
A.thaliana AT3G26730 822285   NP_189307 30
S.cerevisiae MAG2 851147   NP_013531 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)